This page contains documents and links related to WGS protocols and bioinformatics analysis.
Review of the existing initiatives in WGS and preliminary recommendations for further work, 2021
ENGAGE project list of online bioinformatics tools and software used for capacity building
ECDC strategic framework for the integration of molecular and genomic typing into European surveillance and multi-country outbreak investigations
WHO Global Antimicrobial Resistance and Use Surveillance System (GLASS) - Whole-genome sequencing for surveillance of antimicrobial resistance
Microreact tool for open data visualization and sharing for genomic epidemiology